Search

This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …

CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial … for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

RIViT-seq technology could speed up associating transcription factors with their target genes. The … on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of regulon … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

A workflow for capturing the genetic make-up of specific uncultivated microbes … Despite great strides in generating genome sequences for members of the microbial world through bulk community … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone … experience, while others further along in their academic career enjoyed the chance to develop new skills needed …

… led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … recently appeared in the Proceedings of the National Academy of Sciences (PNAS). Switchgrass, Panicum virgatum , is a …

Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … tools are always around, regardless of malfunction or misplacement.  In studying this family of ATs, researchers …

A preview of how large-scale single cell genomics complements metagenomics studies. The Science Researchers … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a previous effort, an … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced …

… of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, cumulatively called lignocellulose, … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential …

Harnessing BER-funded data resources, researchers built an … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … National Laboratory (Berkeley Lab), and the DOE Systems Biology Knowledgebase (KBase). They also built an …