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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 … research, like learning how to optimize the gene editing function of CRISPR-Cas9, to more advanced therapeutic … which focuses on cell biology and how the structure and function of chromosomes relate to inherited traits, and …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. The Science … di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … also regulates enzymes involved in cellulose production in microbes, these biosensors may eventually lead to ways to …
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Taking Stock of the Known and Unknown Microbial Space
… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … said co-first author Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data … art of hands-on microbiology and experimental validation.  Microbes run the world, playing key roles in regulating …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program … metabolism, work on which she will expand with her study of microbes in California’s manmade water transport canals. … of disciplines who seek to better understand the ecological importance of virus-microbe interactions,” Rambo added. Both …
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2025 NeLLi Symposium
…   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … the tree of life, cultivation of new lineages and the function of candidate lineages in biogeochemical cycles and … centered on how to capture, define, quantify, and functionally characterize microbial diversity. The Symposium …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … genome with CRISPR-Cas9 in order to interrogate each one’s function. However, the team first needed to fix a defect in … lead Cas9 to make a lethal double-strand DNA break, a dysfunctional sgRNA would be harmless. The team was thus able …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific … supported, sample/capacity limits, and instructions.  Many of the submissions are done using web-based forms.   To view …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… As part of the ongoing partnership between DOE JGI and UC Merced to … Research Symposium , held February 6 at the University of California, Irvine, Cristhian and Bryan were among 5 UC … . Additionally, Bryan was featuring in a video about the importance of mentoring with Tanja Woyke and her research …
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An Automated Tool for Assessing Virus Data Quality
… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … that play key roles in cycling nutrients such as carbon, nitrogen and sulfur are themselves regulated by viruses in … limits the ability of researchers to accurately perform functional assessment, host prediction, and phylogenetic …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … the October issue of Nature, the study highlights the vast functional diversity of microbes by looking at protein function within them. …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using … these compounds via clear, straight pathways, entailing the function of more than a dozen enzymes. But researchers have … plants make terpenoids, which carry out a diverse array of functions, including acting as antibiotics. But zealexins …
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