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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … confirmation bias, because it enables scientists to study how methanogenesis takes place in the context of the … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science … engineering could lead to sustainable pathways for making high-value bioproducts including biofuels. In addition, the … optimization. Summary Life is all about balance. This study,  recently published in the  Proceedings of the …
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Soil compartments (bulk soil, litter, root and rhizosphere) as main drivers of soil protistan communities distribution in forests with different nitrogen deposition
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  … one of the project co-leads and first author of the study. Members of the Tel Aviv and NCBI teams, who were … effort would be far more effective in achieving higher quality results compared to smaller individual …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI … (formerly DNA Synthesis) call, and he noted the data had driven his lab’s focus on guide RNA library generation and … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have … began to offer a window into viral existence. Along with highlighting the viruses in a given sample, metagenomics … over 125,000 partial and complete viral genomes. That study multiplied the number of known viral genes by a factor …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when it comes to breaking … of researchers have found that there is a striking division of labor between the two groups. Fungi are much more … nitrogen, a key ecosystem nutrient. The Impact This study is the first to dig into a forest floor ecosystem to …
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JGI Scientists Pen Genome Watch Articles
… of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in … the Joint Genome Institute, it is fantastic that graduate students, postdocs, and staff scientists accepted our … opportunity for JGI to work on these, as it allows us to highlight hot topics in genomics.” And it makes sense to …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome Institute, the … the 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest discoveries toward the …
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Busting the Unbreakable Lignin
… shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … order to do so is a resource-intensive process. Now, a new study shows how anaerobic fungi — the kind living in the … than presumed. After all, they’re able to produce enzymes highly efficient at making use of those other two …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have been  … make use of JGI’s breadth of capabilities while also highlighting collaborative research of a scale exceeding a … worldwide who work with more than 10,000 undergraduate students each year. Brian Looney of Duke University is …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the … outline the questions they asked – and answered – in the study that recently appeared in the Proceedings of the … use this unique opportunity to quantify how transitions to higher ploidy could be generating these observed patterns. …
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