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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
Ancient  Chloroflexota s ditched their flagella and other traits when … . Research shows that flagella were lost in other forms of  Chloroflexota that adapted to marine environments … found there utilize a unique array of chemicals not typically found in oceans or soils.  A recent study published …
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iPHoP: A Matchmaker for Phages and their Hosts
… be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like … With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … approaches, researchers have created a new program called iPHoP (pronounced “eye-pop”,  freely available online …
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Benjamin Cole
… plant roots, focusing on genetic components required for effective colonization. In addition, Dr. Cole is … (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome Institute, where he leads three … on HTP DNA design and assembly, strain engineering and bioinformatic tool development/data analysis for synthetic … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for bioenergy and the greater bioeconomy. By bringing …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for bioenergy and the greater bioeconomy. By bringing …
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Matt Blow
… function in bacteria. Since 2016, he has been the lead of the User Support Analysis group. The group performs custom analysis and develops automated pipelines for analysis of resequencing, transcriptome, epigenome and …
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Zhong Wang
… in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics … and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer scientists and biostatisticians. …
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Extracting the Secrets of Secondary Metabolites
… secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … accurately editing genomes, its effectiveness has historically been limited due to the lack of robust tools available …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … methane emissions actually come from livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded reason for studying rumen: Livestock live off plant matter, and …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The … by minimizing flood risks and filtering water. Peat formed there over thousands of years sequesters more carbon … chromosomes ever identified in the plant kingdom. Specifically, researchers found that female plants within a species …
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Streamlining Regulon Identification in Bacteria
… with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … regulation is critical to ensuring genes vital for growth and survival across various environments are … factor. Predicting those relationships bioinformatically is almost impossible, and the experimental process for …
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