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A Plant Root Atlas for Tracking Developmental Trajectories
Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … which is also focused on single-cell and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel …
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Eelgrass Proves to Be Much Younger Than We Thought
Program (CSP 502951, 2016, Population and evolutionary genomics of host–microbiome interactions in Zostera marina and …
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Tapping the treasure trove of atypical phages
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … and it feels so rewarding,” Wint said. For Axel Visel, JGI Science Deputy and a co-founder of the internship … predictor of gene expression levels using machine learning tools. “This was very exciting to see how Rhondene not only …
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Toward More Efficient Artificial Photosynthesis
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence …
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Jeremy Schmutz
For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic … … Jeremy Schmutz is the Plant Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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Metagenomics uncovers gaps in amplicon-based detection of microbial diversity
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Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat
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Compendium of Metabolomic and Genomic Datasets for Cyanobacteria: Mined the Gap
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Exploring Possibilities: 2022 JGI-UC Merced Interns
Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … school.  The interns from this cohort and their respective JGI mentors are: Ruoxi Zhao and mentor Margot Bezrutczyk … And I’m excited to take that with me, along with other tools that I can use to, um, perform computational biology.  …
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Cataloging the Microbes that Manage the Health of River Systems
… systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established … Program and the University of Colorado Anschutz’s Genomics Shared Resource. The work (proposal …
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