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JGI@25: A Single Cell, Myriad Microbial Discoveries
Ocean Sciences described a novel technique to access high-quality genomic information using minute quantities of DNA … and uncultured in laboratories. Other firsts followed. The next year, the JGI team reported the first closed and … lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, inviting the …
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Effects of Polar Light Cycle on Microbial Food Web
… evolved separately from other similar systems, and offers new clues into a unique environment in the natural world. … was separated from the Southern Ocean roughly 5-7,000 years ago and has been well-studied by many researchers for … cycles. Water samples from Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A …
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Ken Chu
… of analytical tools and user interface components for the IMG family of systems. …
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
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Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis
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High-quality draft genome sequence of Rhizobium mesoamericanum strain STM6155, a Mimosa pudica microsymbiont from New Caledonia
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Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with Matt Blow; Sean …
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JGI on the 2021 Highly Cited Researchers List
… multi-institutional research team that combined field data with a reference switchgrass genome to associate … found that anaerobic fungi from herbivore poop might be a new source of novel compounds to help bolster the … aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an international research …
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What Happens Underground Influences Global Nutrient Cycles
… genomes. She and her colleagues have generated a high-quality, phenotyped mutant library in Chlamy, as the alga is … Tfaily of the University of Arizona. Her team aims to use data from an interdisciplinary field campaign taking place … facility that accelerates scientific discovery and pioneers new capabilities to understand biological and environmental …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal biology, diversity, … Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, …
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