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A large sequenced mutant library – valuable reverse genetic resource that covers 98% of sorghum genes
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JGI@25: Studying Sorghum’s Survival Skills
… each variety stores sugars and sequesters carbon. 2015: Epigenetic Control of Drought Tolerance in Sorghum (EPICON) … sorghum plants in drought conditions for three years (2016-2018) in the field in Parlier, California at the UC Kearney … sequenced, this line is sweeter, taller, and grows more biomass. In ongoing work, JGI and collaborators are …
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A Sorghum Pangenome Opens More Doors to Discovery
… and researchers to harness the traits that let this biomass powerhouse thrive. Within its genome, Sorghum … sequence for a line of sorghum, reference genomes have generated insight into drought tolerance, biomass production … for this plant. In other lines around the world, much more genetic diversity exists.  Now, researchers have brought …
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Predicting the chemical space of fungal polyketides by phylogeny-based bioinformatics analysis of polyketide synthase-nonribosomal peptide synthetase and its modification enzymes
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Development of genetic tools for heterologous protein expression in a pentose‐utilizing environmental isolate of Pseudomonas putida
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Defining a Pan-Genome for Antarctic Archaea
… shed light on the global biogeography in the haloarchaeal gene pool, a team led by University of New South Wales … has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his team compared two strains of … Rauer Islands. Additionally, they compared metagenome data generated from samples collected at four Rauer lakes to …
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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Who We Are
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Olpidium, The Key to the Origin of Terrestrial Fungi
… to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … with the two publications of the kingdom-wide, multi-gene phylogeny of fungi by James et al. and Sekimoto et al . … remained largely untouched until seven years later. In 2018, as members of the ZyGoLife consortium , my colleagues …
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Doubling Down on Known Protein Families
… of unique things when it comes to energy cycles — turning biomass into things like ethanol or hydrogen, or solar … sequencing allows researchers to study the entire genetic makeup of these communities via whole genome … work. Other authors on the paper are Fotis Baltoumas, Sirui Liu, Oguz Selvitopi, Antonio Camargo Stephen Nayfach, Ariful …
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Do Genetic Drift and Gene Flow Affect the Geographic Distribution of Female Plants in Gynodioecious Lobelia siphilitica?
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Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion
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