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Harnessing Genetic Diversity in Saccharomyces cerevisiae for Fermentation of Xylose in Hydrolysates of Alkaline Hydrogen Peroxide-Pretreated Biomass
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Microbial sensitivity to temperature and sulfate deposition modulates greenhouse gas emissions from peat soils
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … hold key insights. The way that plants process nutrients has a rich back story — they rely on enzymes that have been … Korea as well as a faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley …
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Microbial Community Analyses Inform Geochemical Reaction Network Models for Predicting Pathways of Greenhouse Gas Production
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Genome-wide functional screens enable the prediction of high activity CRISPR-Cas9 and -Cas12a guides in Yarrowia lipolytica
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Neha Varghese
Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s … and projects through implementation of advanced analysis pipelines and tools as well as development and …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth … As the name suggests, there is metal in the hills, and it has legacy mining that goes back more than 100 years. And in … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … applied to multiple research areas including agriculture, biofuels and bioproducts, and medicine. Wading through 30 … estimated that about 42% of the bacterial diversity has no genomic representation in the public databases. In a …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based … “JGI is one of the largest producers of environmental genomics data and has a strong reputation in the community,” said JGI Chief …
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JGI & KBase at PAG XXVII
XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks …
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Disentangling the effects of sulfate and other seawater ions on microbial communities and greenhouse gas emissions in a coastal forested wetland
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data …
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