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Extracting the Secrets of Secondary Metabolites
… produced in response to hardship or competition. They make up the foundation for a slew of vital products in … exactly how P. luminescens and its secondary metabolites work could yield new tools for pest control. Secondary metabolites are highly regulated in bacteria, making it difficult to identify which pathway …
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Evolution of a Fungal Gene Expression Regulator
… analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome … and cataloging them in JGI’s fungal portal MycoCosm. … The work conducted by the US Department of Energy Joint Genome … Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the US Department of …
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Sphingomonas palmae sp. nov. and Sphingomonas gellani sp. nov., endophytically associated phyllosphere bacteria isolated from economically important crop plants
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CSP Large Scale Call
… is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional … instructions via email.   Human or animal disease-related work will NOT be considered under this program. Plant …
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Matthew Kellom
Matt is broadly interested in the interactions between microbial life and … to humans are of particular interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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Building Sphagnum Genomic Resources
… researchers are developing a number of resources to build up Sphagnum as a plant model system focused on carbon … such as sphagnum’s associations with methane oxidizing bacteria, nutrient uptake, and its productivity and … carbon cycling in diverse environments. In addition, this work reflects a collaboration between two programs within …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a … (EMSL), a DOE Office of Science user facility. The work was partly enabled by the “Facilities Integrating … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … down potential sources of methanogenesis, with metagenomic support from the JGI. First they were able to identify the … methane production to confirm that indeed, they were. The work was enabled in part by working with both the JGI and …
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