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DOE user facilities EMSL and JGI announce FY 2020 collaborative … and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for support from 53 received through a joint … the Sierra Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming …

Merced. What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has brought … have a number of initiatives across several different campuses with this being our largest and most successful one. …

… called galls.  In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these weird little pods. …

…   This highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes … analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data with existing bioinformatic …

… time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. … comprised of two (or more) participants. One is a fungus (usually belonging to the ascomycetes, one of the two … work was supported by an intramural seed grant (IGSP 2008001) to DA, FL, and FD from the Duke Institute of Genomic …

… of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in … used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on the list. … records of 8,350 organisms along with 4,355 genomes and 13.6 million genes. The results reveal that fermentative …

… her Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and … of Application Development Systems at Gene Logic, Inc. from 1997 to 2005, responsible for the development of key … K, Ratner A, Huang J, Huntemann M, Hajek P, Ritter SJ, Webb C et al. The IMG/M data management and analysis system …

… identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic … biogeochemical cycles around them. By understanding more about the genomics of MGEs and their evolution at the … the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the …

New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s climate. Most methane is produced … Alternate Metabolic Pathways And there is something special about these new lineages recently tied to methanogenesis. …