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… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life … either jumpstart acceleration or optimize their code on GPUs. While the  OLCF is organizing nearly a dozen hackathons … to the Team Proposal tab to submit. For more information about the 2019 GPU Hackathons, go to:  …

… Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it looks like a duck and quacks … ocean could fix less carbon when infected. Little is known about virus-infected microbial cells that are transformed … under the Facilities Integrating Collaborations for User Science (FICUS) initiative through an award to MBD and …

… advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … assesses what fraction of the microbial diversity we know about, and proposes a path forward to curate and cultivate …

… special groups of actinobacteria Streptomyces is more than just a funny word. The 500 species described within the group … for infectious disease. Streptomycetes are also abundant in soil and can be used as biocontrol agents and to … in the JGI Natural Prodcast podcast , where she talks about this community resource. ) “Most people study …

… which microbes are present in a sample, to generate data about which organisms are active, and which microbes are … microbial ecosystems. These communities harbor tens of thousands of different organisms who all consume different … to compare?” said Malmstrom, who worked with JGI Metagenome Program head Emiley Eloe-Fadrosh to host researchers in …

… technology has changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for … JGI staff, collaborators and users to see how software and supercomputing capabilities have evolved to enable … from this sample set through the Community Science Program, it was the largest project the JGI had ever put …

… discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public databases and … fungi produce and manage energy at the cellular level. Because the annotations are standardized and span the full … that carry them were strikingly different in both size and organization: Mitochondrial genome size and structure varied …

… Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how plants coordinate their gene expression … day. At the Joint Genome Institute, Dr. Cole’s research focus has been on understanding how microbes can colonize plant …

… developed to help inform scientists and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to correlate protein annotations with ratios of … (LDA) and k-Nearest Neighbor (KNN) Classification. LDA is a supervised data compression technique that was used to take …

… December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … proposals: Collaborate With a U.S. DOE User Facility: Learn About Available Expertise and Resources, Open-Call … Integrating Collaborations for User Science (FICUS) program allows scientists access to multiple user facilities …

… are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant representatives of deep subsurface ecosystems. A team … Berkeley National Laboratory (Berkeley Lab). To learn more about how microbial populations respond to virus infections, …

… off early from aerobic fungi, which can breathe oxygen — just like we do. Oxygen is a rich source of energy, and because anaerobic fungi can’t harness it, scientists long held … known natural product: baumin. Baumin is an antioxidant, previously known to be made only by aerobic fungi. In …