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Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System
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Metagenomes and Metagenome-Assembled Genomes from Microbial Communities Fermenting Ultrafiltered Milk Permeate
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FISH–FACS Enabled Targeted Recovery of Genomes from Uncultivated Environmental Microbial Populations
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Single-cell genomics reveals complex microbial and viral associations in ciliates and testate amoebae
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights into how these ocean photosynthesizers cycle … National Laboratory’s NSLS-II used multiple x-ray techniques combined with advanced computational simulations … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. … U.S. Department of Energy (DOE) supports research programs for developing methods for converting plant biomass into … like P. hallii , researchers can develop crop improvement techniques that could be applied to switchgrass. Summary …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of … fungi, researchers struggle to identify and classify new species from environmental samples. Meanwhile, even … Studies cited in the review show that machine learning techniques can successfully predict fungal lifestyles and …
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Disclaimer
… NOTICE Information from this server resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to … With respect to documents available from this server, neither the United States Government nor the University of California nor any of their employees, makes any warranty, …
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User Executive Committee Charter
… Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … including areas where more or less capacity is needed, new capabilities desired, or capabilities that could be …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple … to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently … mycorrhizal species. The 62 mycorrhizal species include 29 newly-sequenced mycorrhizal genomes. With so many fungal  …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science … The work conducted by the U.S. Department of Energy Joint Genome Institute …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles … surface of plants, is a comparatively understudied area of forest ecosystems as past studies have mainly focused on … the JGI here . Bennett is applying the same experiment to a new environment. She is currently working on her thesis to …
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