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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint Genome … to as natural products, the proposal includes plans to sequence several thousand Actinobacteria strains and then …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The Science After a wildfire burns, … which microbes in the soil persist after a wildfire — and why they thrive — gives forest managers more avenues to … builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful snapshot of what soils …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… 25-plus years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and … before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. Last … assembly and analysis.   To put these efforts into perspective, we caught up with JGI staff, collaborators and …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match characteristics — … of Sciences bridges this gap, by tracing the evolution of a specific enzyme family called aminotransferases (ATs). These … to the way many organisms function, they have a sense of why nitrogen metabolisms can be so varied.  As evolution has …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Innovative technology from this biomanufacturing collaboration is available for licensing. The … of wastewater, but it contains most of the nitrogen and phosphorus. Researchers around the world are exploring ways of … (LDRD). The work conducted by the U.S. Department of Energy (DOE) Joint Genome Institute ( …
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JGI on the 2020 Highly Cited Researchers List
… by Clarivate Analytics as “true pioneers in their fields over the last decade, demonstrated by the production … that  released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  Nature … also led researchers to identify a gene related to seed dispersal in wild populations for the first time. I-Min Chen …
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Genome Sequence and Analysis of the Flavinogenic Yeast Candida membranifaciens IST 626
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Genome Sequences of 42 Bacteria Isolated from Sorghum bicolor Roots
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Chromosome assembled and annotated genome sequence of Aspergillus flavus NRRL 3357
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Genome‐wide associations with flowering time in switchgrass using exome‐capture sequencing data
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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
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The “Most Wanted” Taxa from the Human Microbiome for Whole Genome Sequencing
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