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Automated group assignment in large phylogenetic trees using GRUNT: GRouping, Ungrouping, Naming Tool
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PhycoCosm Tutorial
… (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …
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Dispatches From JGI Interns
Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and graduate students to …
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The Expanding Universe of Methane Metabolisms in Archaea
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome data … related to known methanogens. With the help of this information, the researchers found evolutionary … found on early Earth.”  Through the JGI Community Science Program, Inskeep and McKay recovered metagenome-assembled …
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Kjiersten Fagnan
Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a … Data Collaborative where she leads infrastructure and user-centered design efforts. … PhD Applied Mathematics … approaches in support of meeting DOE mission critical programmatic goals. … Joubert et al., “Attacking the Opioid …
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A Collaboration to Improve Plant Genome Annotations Across Species
… of Energy (DOE) Joint Genome Institute (JGI)*, a national user facility located at Lawrence Berkeley National … Faculty Investigator Jeremy Schmutz is the Plant Program Lead at the JGI. Sarah:  Why is a resource like this … understand the gene function and add additional biological information. As I’ve said earlier, 16 to 56 percent of plant …
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UC Merced Interns Reflect on Their JGI Summer Projects
… language processing techniques to categorize genetic information. Learn more about their work here in a series of … at the end of the summer. The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring … foster a diverse future workforce in science. Since the program’s inception, more than 30 students have contributed …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… researchers to submit white papers to the Community Science Program’s  Functional Genomics call for proposals .  On July … or through the  “Facilities Integrating Collaborations for User Science” (FICUS) initiative .  Q: What is the … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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Learning to Look
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a computer could … Scientific Computing Center , another DOE Office of Science user facility.   … The U.S. Department of Energy Joint … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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2023 Progress Report
Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, …
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Defining the Boundaries and Characterizing the Landscape of Functional Genome Expression in Vascular Tissues of Populus using Shotgun Proteomics
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Identification of Cellulose-Responsive Bacterial and Fungal Communities in Geographically and Edaphically Different Soils by Using Stable Isotope Probing
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