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Characteristics of Wetting-Induced Bacteriophage Blooms in Biological Soil Crust
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Triggering Morel Fruiting
… an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … The genome sequences and annotations are available on JGI’s fungal portal  MycoCosm . Based on these analyses, we … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Dan Rokhsar
… 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards … animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome … Department and in 2002 he became a Professor of Genetics, Genomics and Development after his research interests …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for … Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the entirety … and  Methanomethylicia   — grow by methanogenesis. Both studies were recently published in  Nature .  Researchers …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… Woyke (Biology and Biochemistry)  Here’s a selection of studies these busy bees contributed to:  Giant bacteria … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Ian Blaby
… analysis for synthetic biology and functional genomics. Prior to joining the JGI, he was a group lead at … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral … to reveal the functional links between gene networks. BMC genomics. 20:12. 2019 Anderson et. al., Exploiting algal …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His … of community-building efforts in the field of viral ecogenomics. For this role, Dr. Roux can rely on more than 10 … years of expertise in the fields of virus ecology and virus genomics, where he has engaged in collaborative, …
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Calculating the Costs of Multiple Switchgrass Gene Copies
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… State University has been conducting microbial field studies at Yellowstone, and in this latest report, published …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… design and synthesis superpower. Through a series of case studies, JGI scientific users share how they’ve worked with … their collaborations. One review article in the collection, Genomics-enabled analysis of specialized metabolism in … DNA synthesis Community Science Program (CSP) Functional Genomics, the system allows scientists to test enzymatic …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… of SIP experiments have generated plenty of insights, many studies don’t report the information needed to reuse and … improve data accuracy and make results from different SIP studies easier to compare?” said Malmstrom, who worked with … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like these …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… sediment like a leaf.” The lab conducted some microscopy studies over the next couple of years, and realized it was a … “We started this project under the JGI’s strategic thrust of inter-organismal interactions, because large sulfur … the entire cell.” The JGI team then used single cell genomics to analyze five of the bacterial cells on the …
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