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The phytoalexin camalexin induces fundamental changes in the proteome of Alternaria brassicicola different from those caused by brassinin
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Metagenomic reconstruction of nitrogen and carbon cycling pathways in forest soil: Influence of different hardwood tree species
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Enzymatic Adaptation of Podospora anserina to Different Plant Biomass Provides Leads to Optimized Commercial Enzyme Cocktails
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Potential Biocontrol Activities of Populus Endophytes against Several Plant Pathogens Using Different Inhibitory Mechanisms
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions … on amino acid sequences.) Sevim is currently using HMM profiles of protein domains from the pfam database to test … in order to create more useful tools for the bioinformatics community. Other work presented at the workshop included how …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the … science, creating opportunities for the global research community. The U.S. Department of Energy (DOE) Joint Genome … a broad vision and multiple scientific, technological, and operational themes and objectives for the next five years. …
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Eelgrass Proves to Be Much Younger Than We Thought
… one of the most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, … craft a genetic clock based on its divergence with a  different species. However, eelgrass didn’t have a reliable … from the US Department of Energy Joint Genome Institute Community Sequencing Program (CSP 502951, 2016, Population …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The … common images in many regions due to more extreme weather events such as heat waves, droughts and floods. The … expression in the same manner in the two cultivars and some differently. Some different responses relate to functioning …
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Computationally Classifying Fungal Lifestyles
… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” a computer how to classify 101 representative … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved …
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Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample
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Structural dynamics and transcriptomic analysis of Dehalococcoides mccartyi within a TCE-Dechlorinating community in a completely mixed flow reactor
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