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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past summer. This … Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth Promoting Rhizobacterium Graduate …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions due to more extreme … University of California (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for … the CRISPR-Cas9 tool for a non-conventional eukaryotic host — an approach, the team says, that could be applied to …
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JGI Announces 2023 Community Science Program Awardees
… Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility … genomics, inter-organismal interactions, understanding natural communities important for carbon storage, nutrient …
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Behind the Paper: Hot Springs Metagenomics
… Adapting the graduate research experience amidst a global …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two genome copies, one from each parent. Having three or more genome copies from additional parents or …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … Filling in the Plant Tree of Life … Genome Insider …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are hermaphrodites, expressing both male … provided by the National Natural Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. … for Science where he studied the molecular basis of a plant host’s susceptibility to pathogens. Dr. Vogel’s current … grass that is well suited to experimental manipulation in the laboratory because of its compact genome, diploid …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … Methanogenic microorganisms therefore play a critical role in the global carbon cycle, and are of significant interest … to sample the entirety of a microbial community out in its natural environment, scientists have shown at least two …
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