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Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola
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Close association of RNA polymerase II and many transcription factors with Pol III genes
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Bidirectional titration of yeast gene expression using a pooled CRISPR guide RNA approach
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and around Earth … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … first legume species with a published complete draft genome sequence. At the time, the vital global source of both … guys,” said Duplessis, who has collaborated with the JGI on multiple projects involving rust pathogens. “All along the …
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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science … in their proposal as long as they’re staying under the sequence cap? A(nswer): Proposals that are looking at multiple areas or multiple ways to answer questions are … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Identification of a gene encoding the last step of the L-rhamnose catabolic pathway in Aspergillus niger revealed the inducer of the pathway regulator
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Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … preset for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ … They include Jalview (for viewing and modifying multiple sequence alignments). Variation view on individual …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple microbiology and ‘omics techniques to … in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes …
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