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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer … can develop high-throughput and high-resolution studies of interactions between host cells and viruses in the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and … (Module 1), Experimental Design and Sample Metadata (Module 2), Sample Collection and Processing (Module 3), Data … Foundation Integrative Organismal Systems - Plant Biotic Interactions 2029168 award. This material is based upon work …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… On July 30, UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was preceded by … to date.  This summer internship program, which began in 2014, pairs undergraduate and graduate students from UC …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC … date, involving more than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from … of life, they tracked the evolution of 5mC pathways across 528 species. The researchers found that unlike most flowering …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational … AB in Physics, Princeton University, NJ MS in Theoretical Physics, Cornell … Publications … Award, National Cotton Council 2009 Friday Evening Lecturer, Marine Biological Laboratory 2000 John Simon …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for … opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … properties, communities and ecosystems.” Building off multiple collaborations, Lab researchers working with the …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… This is excerpted from the full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, … : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further confirmed by …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This … distachyon root transporters in plant-microbiome interactions ” Cory-James Pugne-Andenoro : “The best part of … Deze Kong & Yasuo Yoshikuni Project: “ Development of a multiplex genomic integration system for the selection of …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex … in  Nature Plants  on July 15, researchers have developed multiplexed assays — experimental techniques that allow …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that … enzymes in specialized metabolism, organisms tend to evolve multiple copies of enzymes, similar to including half a …
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