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Genome-scale metabolic rewiring improves titers rates and yields of the non-native product indigoidine at scale
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Metabolic and evolutionary responses of Clostridium thermocellum to genetic interventions aimed at improving ethanol production
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An Improved Method of RNA Isolation from Loblolly Pine (P. taeda L.) and Other Conifer Species
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Understanding Wildfire Recovery, Starting in Soil
… begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … published in Nature Microbiology , went a step further, using both DNA and messenger RNA (mRNA) sequencing to …
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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
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Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus
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Diversity of genomic adaptations to the post‐fire environment in Pezizales fungi points to crosstalk between charcoal tolerance and sexual development
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … across different ocean latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. … the JGI Algal Program, which explores genomics of algal diversity and biology to support basic science as well as …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … . Huberiarchaeum. Both organisms are part of the DPANN superphylum of Archaea. This pair is abundant in two subsurface … confirm the microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … environmental samples to help uncover the phylogenetic diversity of the human gut microbiome. By bringing their …
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Zymomonas diversity and potential for biofuel production
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A catalog of the diversity and ubiquity of bacterial microcompartments
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