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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  … the sea, that you all know,” Vardi shared. Crucial for the global carbon cycle, photosynthetic phytoplankton do not … that enable systems-based scientific approaches to these challenges.  DOE’s Office of Science is the largest …
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry
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Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts
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Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics
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PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities
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Building a custom high-throughput platform at the Joint Genome Institute for DNA construct design and assembly-present and future challenges.
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to … Genome Project (HGP), and building upon the principles for open access in the field of genomics established in  … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 …
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Trent Northen
… large DOE-funded research programs using mass spectrometry for energy and environmental research, including through the … JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the …
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DAS Tool for Genome Reconstruction from Metagenomes
… genomes from soil metagenomes compared to other methods. The Impact Understanding how individual microbes … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … to address pressing energy and environmental scientific challenges. In Nature Microbiology , a team led by longtime …
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Protocol for condition-dependent metabolite yield prediction using the TRIMER pipeline
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Connecting chemical and protein sequence space to predict biocatalytic reactions
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