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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” … Berkeley; Gregor Mendel Institute of Molecular Plant Biology (Austria); Leibniz Institute of Plant Genetics and … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … and through a Challenge Grant from the California NanoSystems Institute at the University of California Santa …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … team to associate climate adaptations with switchgrass biology, information that could be useful toward the DOE’s … across the chromosomes. “In the past, we needed model systems to test genetic hypotheses in species with large and …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental … include:  environmental microbiomes biodesign and synthetic biology AI/ML-enabled laboratory automation, data … worldwide to explore complex biological and environmental systems using advanced experimental and informatic tools at …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have … co-led by Daniel Rokhsar, head of the JGI’s Computational Biology Program, along with JGI Computational Scientist … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … nutrient cycling that evolved separately from other similar systems, and offers new clues into a unique environment in …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program … Internship co-founder Axel Visel and UC Merced Quantitative Systems Biology professor Carolin Frank reflected on the past decade …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new … in solving DOE’s most challenging problems. … PhD Cell Biology. Duke University MS Developmental Biology, Chinese … metagenome binning software … Education … Selected Publications … Software …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving … Yoshikuni and his team  announced in  Nature Microbiology an important addition to the synthetic biologist’s …
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W. Berkeley Kauffman
Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to …
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Ken Chu
Ken leads the development and maintenance of analytical tools and user interface components for the IMG family of systems. …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part … of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, … Microbiology Resource Announcements … Education … Selected Publications … Awards and Honors …
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