Results

MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomes.
Learn more
MArVD2: a machine learning enhanced tool to discriminate between archaeal and bacterial viruses in viral datasets
Learn more
Meta-virus resource (MetaVR): expanding the frontiers of viral diversity with 24 million uncultivated virus genomes
Learn more
Phylogenetic proximity is a key driver of temporal succession of marine giant viruses in a five-year metagenomic time-series
Learn more
The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into … of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta … a DOE Office of Science User Facility, for publicly available metagenome data provided by the other study …
Learn more
A Powerful Technique to Study Microbes, Now Easier
… Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with … researchers and robots have made these experiments easier for scientists everywhere. …
Learn more
Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
Learn more
Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
Learn more
Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … high-quality datasets, enabling global insights from modeling, machine learning, and subsequent experiments.  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
Learn more
What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS … projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy … reaction networks, and also assessing the role of viruses in the soil microbiome. Another accepted proposal in …
Learn more
N-dependent dynamics of root growth and nitrate and ammonium uptake are altered by the bacterium Herbaspirillum seropedicae in the cereal model Brachypodium distachyon
Learn more
An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a … reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes … a specific enzyme, Methylthio-alkane Reductase (MAR) in host bacteria Rhodospirillum rubrum . Their work in Nature …
Learn more