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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a … single step, directly into the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says … select group of bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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How Maize Makes An Antibiotic Cocktail
… it against infections — using surprisingly few enzymes. The Science Maize ( Zea mays ) produces a plethora of antibiotics called zealexins. Even though scientists have identified at least 15 zealexins, they … buck. The research team reports that transferring just four genes encoding these enzymes to another plant, such as  …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … high throughput approach for isolating individual bacterial cells and amplifying their genetic material, thus bypassing … the Microscale Applications group to operate a similar single-cell genomics pipeline that provides JGI users access …
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A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants
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Cynipid wasps systematically reprogram host metabolism and restructure cell walls in developing galls
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Regulation of hair cell and stomatal size by a hair cell-specific peroxidase in the grass Brachypodium distachyo n
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting … Investigator call for proposals.  Tips: Contact us with your questions (jgi[email protected]) Carefully read … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Single Nucleotide Polymorphism Charting of P. patens Reveals Accumulation of Somatic Mutations During in vitro Culture on the Scale of Natural Variation by Selfing
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An Automated Tool for Assessing Virus Data Quality
… assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … who encounter an elephant for the first time. Based on the single body part each blind man touches – a tusk, the ear, …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and the Innovative Genomics Institute.  The Science Researchers report the discovery of miniature … of thermostable Cas9 genes . The work also used resources at the National Energy Research Scientific Computing …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… For bacteria, that salty, slightly stinky air is a rich source of the sulfur they need to grow and divide. Similar to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades evokes images of fanboats … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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