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… genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More recently, these … PacBio reads (i.e., reads with very low error rate), so our pipeline performs long-reads-only assemblies and not … Depending on the project setup, we can include as part of our data analysis plan mapping of short-reads datasets …

… microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial … the genome analysis and Bioinformatics core at Integrated Genomics Inc. in Chicago, IL. He did his postdoctoral … on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel methods for enabling …

… Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting data sharing to accelerate discovery … available to all users for any application while also encouraging data users to cite the original data source. …

… (MBIB) Division, and Energy Storage & Distributed Resources Division at Berkeley Lab.  Building on the momentum … from UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on … single cell and systems biology, omics, and big data science, machine learning for experimental science, energy …

… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional collaborative knowledge …

… collaborators and other scientific organizations. Fungal biologist Stajich from UC Riverside sees the JGI’s … and education communities access and build on the JGI’s resources. The UEC represents the JGI user community and is … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been …

… processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by the Oak Ridge … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the … “JGI is one of the largest producers of environmental genomics data and has a strong reputation in the community,” …

… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under contract number …

… has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and … Trent Northen is the Metabolomics Science Program Head at the JGI. Click to learn more about … UC Berkeley Haas School of Business DOE Oppenheimer Science and Energy Leadership …

… gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library … published in the  Proceedings of the National Academy of Sciences (PNAS), offers more ways for scientists to explore … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… A preview of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated the value of conducting … microbial populations. The work appeared in The ISME Journal . Members of the Dunfield lab collected samples from …

… aims to broaden awareness of and access to JGI public resources and the DOE mission, as well as help cultivate the … collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive experience shaping … portfolio spans a wide range of topics beyond translating science, including crafting technical reports, developing …