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Marine Microbe Contains Multitudes
… genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. … in Microbiome has uncovered that SAR324 encompasses four subgroups, adapted to different oceanic depths and … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …
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Len Pennacchio
… … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data … technologies and providing a vision for future technical JGI directions for DOE User science. … Complete Publications … of Regents Working Group on “NIH Comparative Genomics Resource” 2021-  Co-Chair, “Advances in Genome Biology & …
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Hiroshi Otani
… of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … Savchenko, A., and Eltis, L.D. (2016) The activity of CouR, a MarR family transcriptional regulator, is modulated …
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High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona
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Viruses Reprogram Cells into Different Virocells
In  their study , which appeared in  The ISME Journal , they focused on how virus-infected microbes are … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … through an award to MBD and MBS (#2582) and used resources at the DOE Joint Genome Institute and the …
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Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … sitting on the [Walnut Creek] campus … It was a resource-rich environment,” Lawrence said. While interning, he … distilling complex things … they really just help get your point across as quickly as possible,” he said. After …
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about …
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