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Frederik Schulz
… sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and … a single-cell-based discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel …
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The More the Merrier: Making the Case for Plant Pan-genomes
Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature … small genomes, short life cycles and can be easily transformed, traits that make them easy to work with … Polyploid Genomes in a Pan-genomic Context For the study, partly enabled by the JGI’s  Community Science …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or … Catalog . Published in the October issue of Nature, the study highlights the vast functional diversity of microbes … and their genetic sequences. Roux was first author on a study featuring a new program called iPHoP , which combines …
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Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Finding the Fermenters
… the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … an interactive browser that allows other researchers to study the genomes and predict the metabolic abilities of these microbes. The Impact This study illustrates how the research community brings together …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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NeLLi — Symposium on New Lineages of Life
… and functional capabilities. Overview of Symposium Goals Metagenomic and single-cell sequence data have provided a … novel microbial lineages, leading to a new appreciation for the extent of diversity. The phylogenetic and functional … of these new lineages will provide new cornerstones for research in the areas of bioenergy and biomedicine, as …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In 2009, researchers at the JGI and the Bigelow Laboratory for Ocean Sciences described a novel technique to access … from individual environmental cells. The proof of principle study built off earlier approaches and offered a way for … of the tree of life. Used in tandem over the years, metagenomics and single cell genomics have afforded JGI …
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