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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for …
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When “The Blob” Made It Hotter Under the Water
… marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A team of … ocean known as “The Blob.” The event was recorded during a long-term study of microbial communities in the northeastern … in the ocean drive the biological pump that takes carbon from the atmosphere and keeps it in the deep ocean. With …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of … terpenes play key roles in plant growth, defense, and environmental interactions. Terpenes are also economically important because of … by FAPDF grant “Nextree” 193.000.570/2009. For the portion of the work conducted by the Joint Genome Institute and …
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A Collaboration to Improve Plant Genome Annotations Across Species
… Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in … for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work … describing the atlas published in  Nucleic Acids Research . Does this mean the project is over, or will you continue to …
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Dan Rokhsar
… JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After … AB in Physics, Princeton University, NJ MS in Theoretical Physics, Cornell …
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Shoring up the base: the development and regulation of cortical sclerenchyma in grass nodal roots
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Fungal & Algal Program
… and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and … that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. This research helps translate their … play a critical role in ecological processes such as carbon cycling, biodegradation and biogeochemistry. The …
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Accessibility/Section 508 Statement
… U.S. Department of Energy is committed to making its electronic and information technologies accessible to individuals with disabilities … or concerns related to the accessibility of this website to DOE Section 508 Coordinator mailbox.   For more …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, … of Science user facility located at Lawrence Berkeley National Laboratory, have collaborated with global researchers on projects related to understanding how the interactions …
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An Automated Tool for Assessing Virus Data Quality
… Through advances in sequencing technologies and computational approaches, more and more virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality and … sequences vary widely. In a previous effort, an international consortium recommended specific guidelines and best …
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Finished Genome of Zymomonas mobilis subsp. mobilis Strain CP4, an Applied Ethanol Producer
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A Plant Root Atlas for Tracking Developmental Trajectories
… zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with previously published datasets. The work was  … the roles played by neighboring cells in these processes.   One of the study’s co-authors is  Benjamin Cole , a research …
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