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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also … Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly … These days, Session is starting his lab at Binghamton “studying polyploids and transposon evolution, expanding on …
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Trent Northen
Dr. Northen is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic … mass spectra with statistical significance. Nat Commun. 13, 2510 (2022). https://doi.org/10.1038/s41467-022-30118-9 …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … His responsibilities include the development of novel computational tools to identify virus sequences, the design of new … Biology, Université Blaise Pascal, France … Neri et al., 2023. Expansion of the global RNA virome reveals diverse …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Rex Malmstrom
… is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022.   A centimeter-long bacterium with DNA contained in …
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Complete genome sequence and the expression pattern of plasmids of the model ethanologen Zymomonas mobilis ZM4 and its xylose-utilizing derivatives 8b and 2032
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Genome sequence of Ensifer meliloti strain WSM1022; a highly effective microsymbiont of the model legume Medicago truncatula A17
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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Making a Lichen Together
Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) participants. One … hundreds of microalgae are able to partner to form lichens. Studying the symbiosis by investigating a lichen’s genomes … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the … Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after the JGI was established to work on the …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental … Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  Ensifer Species during Free-Living …
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Meeting Code of Conduct
All participants and staff of the JGI events are required to adhere to the following Code of … event is to build a stronger community. Our goal is to create an environment where everyone feels welcome to participate, speak up, ask questions, and engage in conversation. …
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