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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … to better understand what this sulfur-oxidizing, carbon fixing bacterium was doing in the mangroves. “Mangroves and … Foundation. “This groundbreaking discovery highlights the importance of supporting fundamental, creative research …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… scientists and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to correlate protein … The work conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the Office …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … The planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers … actinobacteria play roles in both the carbon and nitrogen cycles, break down plant mass (think biofuels ), …
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The United States Culture Collection Network (USCCN): Enhancing Microbial Genomics Research through Living Microbe Culture Collections
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … minimum zones identified SAR11 bacteria as initiators of nitrogen loss in these waters. The top image on the left … to experimental characterization and validation of the functional potential of these new lineages. …
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques and data analyses compile … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this program is an …
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … on cotton production, and the crop’s annual economic impact of $500 billion worldwide underscores its value and importance in the fabric of our lives. In the United States, …
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Trent Northen
… to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the development and application of advanced mass spectrometry approaches and model … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis … in France and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Compared to the high consumption and acquisition of carbon, nitrogen was not substantially exported from the exogenous …
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Comparative transcriptomics of CAZy enzymes in white- and brown-rot agaricomycetes: Evolutionary insights into lignocellulose degradation and the relevance of GH16 glycoside hydrolase functional divergence
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Finding the Fermenters
… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … the genomes and predict the metabolic abilities of these microbes. The Impact This study illustrates how the research … project . They also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. …
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JGI at the AGU Fall Meeting
… Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … Restoration on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O …
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