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A Community Resource for Secondary Metabolite Researchers
… expediting BGC and biosynthesis research.  Summary Over the years several secondary metabolites databases have been made … of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. …
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Tracing the Evolution of Shiitake Mushrooms
… Lentinula genus diverged roughly 28 million years ago, when the largest mammal ever, Paraceratherium, … and DEB-1442113 to A.R., the Department of Energy award 0000238431 to D.H., the GENOBIOREF (BIO2017-86559-R) project of … of Energy operated under contract no. DE-AC02-05CH11231. …
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Mapping Heat Resistance in Yeasts
… that a new genetic mapping strategy called RH-Seq can identify genes that promote heat resistance in the … between species that have been separated for millions of years. The study highlights the genes that could be used to … US Department of Energy under contract no. DE-AC02-05CH11231. The work was supported by R01 GM120430-A1. …
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A Model System for Perennial Grasses
… genomes from varieties that diverged over a million years ago. The hallii variety thrives in desert … reference genomes for P. hallii , researchers can identify and characterize the regulatory elements that influence … US Department of Energy under contract no. DE-AC02-05CH11231. The UT Brackenridge Field Lab and the Ladybird Johnson …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… that adapted to marine environments hundreds of millions of years ago.  The Impact Chloroflexota are bacteria that act … of Energy operated under Contract No. DE-AC02-05CH11231. Work carried out at Lawrence Livermore National …
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When “The Blob” Made It Hotter Under the Water
… United States began forming in Alaska. Over the next two years it slowly spread, raising water temperatures by a few … the U.S. Department of Energy under Contract DE-AC02- 05CH11231, the G. Unger Vetlesen and Ambrose Monell Foundations, …
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Uncovering Novel Genomes from Earth’s Microbiomes
… can’t be sequenced using traditional approaches. Identifying and characterizing the planet’s microbial diversity is … of which had not already been associated with a host – with 23,000 MAGs. Modeling A New Path for Metagenomics …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… and filtering water. Peat formed there over thousands of years sequesters more carbon than all other vegetation types … peatlands in the face of a warming climate. Identifying these sex chromosomes and their role in sphagnum’s … Facility, is supported under contract no. DE-AC02-05CH11231. …
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Marine Microbe Contains Multitudes
… cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean Time-series (HOT), they collected … namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial species. All SAR324 have very closely related … by grants from the Simons Foundation (#329108 and #721223 to EFD) and Gordon and Betty Moore Foundation grant GBMF …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… U.S. Department of Energy under Contract No. DE-AC02-05CH11231. …
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Katherine Louie
… analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists … to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex communities, and … genomic data (MAGI) for functional annotation and identifying unknown compounds (Pactolus). …
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Making a Lichen Together
… that in this symbiosis going back hundreds of millions of years, accidental gene swaps via horizontal gene transfer … and Policy (for DNA sequencing and assembly); by a three-year subcontract to DA, FL, and FD (for bioinformatics) from … U.S. DOE Office of Science under Contract No. DE-AC02-05CH11231. The work of MP, DL and SSM was supported by the U.S. …
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