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Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team … to access the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since …

… have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and … shared their thoughts on the students’ efforts. Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial … Responses Under Climatic and Environmental Change (SPRUCE) project Melanie LeGro (2016 graduate intern): Currently …

Microbial cells infected by viruses undergo metabolic reprogramming. The … and Environmental Research in one proposed research project. For this project, RNA sequencing was done by the JGI, and proteomics …

Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … too costly for them. The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help … clearly have unexpected chemical potential. … This research project was supported by a grant from Santa Barbara Cottage …

… with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … (LLNL), the Microbes Persist: Systems Biology of the Soil Microbiome  Science Focus Area (SFA), is producing hundreds …

Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay … by passionate scientists working on interdisciplinary projects. I feel inspired to pursue a career in STEM. … to know you and provide all resources to excel in your project.”     Vicente Ramirez, UC Merced JGI Mentor: Albert …

In the summer of 2015, Adam Session was a postdoc working at … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded … in genomes.” He’s working with Rokhsar on a newer genome project, and enjoys the fact that he can use what they’ve …

…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was … wetlands in south Texas,” he explained. “In terms of my project, I wanted to incorporate that CSP, but also look at …

This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to … worked with Zhong Wang’s group on an aspect of the same project assigned to Sharon and Cristhian; and, Lizhen Shi , …

XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … science opportunities. Learn how to apply for a project with the JGI Community Science Program, and how you …

A workflow for capturing the genetic make-up of specific uncultivated microbes … The Science A team led by researchers at the Max Planck Institute (MPI) for Marine Microbiology has developed, … be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …

High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science … with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope probing (SIP) …