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Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to start … JGI researcher, Zhong Wang, have adjunct faculty positions with the SNS, and Wang’s group was hosting another QSB …

… was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint appointment with … the genetic codes of plants is often challenging because in many plants chromosomes are present in more than two … an early algorithm and developing it in order to talk about the subgenome identity.”  These days, Session is …

… species is made of four ecologically distinct groups with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … surface, to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. …

Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of 50 letters of intent submitted. Many of the proposals focus on harnessing genomics to developing sustainable …

… time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. … comprised of two (or more) participants. One is a fungus (usually belonging to the ascomycetes, one of the two … Photobiont and fungus (mycobiont) live intertwined, with the photobiont transferring part of its …

… first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those … inside the host’s genome, living quietly and replicating with their host indefinitely. Now, in studying a microbial …

… hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators (PIs), Co-PIs, and collaborators. *Unique users are counted once, even though an individual may have … DOE Quarterly Metrics Q1 – Report on new computational developments for improving microbial, metagenomic, or plant …

… genomics can add significant value to the other commonly used culture-independent sequencing approaches including … cells harbored mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that … the planet’s nutrient cycles and are potentially of use in fields ranging from agriculture to biotechnology and …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are … the fruiting-related decomposition mechanisms of morel with multi-omic approaches, our results revealed a striking …

Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen interest in the … genomes, is rising. The purpose of this Workshop is to illustrate the expansion of this field and bring it to the … In this workshop, we will present current and ongoing developments at the JGI and KBase toward integrative biology …

… a family of compounds that protects it against infections — using surprisingly few enzymes. The Science Maize ( Zea mays … scientists have identified at least 15 zealexins, they suspect there are even more to find. Zealexins are produced … Plants that the zealexin pathway has an “hourglass” shape with diverse precursors in, and many different products out, …

… off early from aerobic fungi, which can breathe oxygen — just like we do. Oxygen is a rich source of energy, and because anaerobic fungi can’t harness it, scientists long held … in their hunt for anaerobic fungi. By growing extracts without oxygen in ruminant fluid — which smells terrible …