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You Can Move, But You Can’t Hide
… identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic … biogeochemical cycles around them. By understanding more about the genomics of MGEs and their evolution at the cellular level, … (https://ror.org/05v3mvq14), are DOE Office of Science User Facilities operated under Contract No. …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo … so nice and helpful.”     Mo Kaze, UC Merced JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and really open to talking about their work. It’s fun to be around people who are …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, more and more … an international consortium recommended specific guidelines and best practices for characterizing uncultivated …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular characterization capabilities in just … Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS proposals have helped advance …
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Igor Grigoriev
… training at UC Berkeley and work in the pharmaceutical industry. He holds joint appointments as Fungal and Algal … protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes … geomics and PhycoCosm portal. Dr. Grigoriev engaged thousands of researchers in genome projects and organized …
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Mapping Heat Resistance in Yeasts
… species to grow better than its closest relative S. paradoxus at high temperatures (39°C/102°F). The Impact One of the … biofuel production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence Berkeley National Laboratory, aim …
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Fungus Fuels Tree Growth
… a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can … of endophyte  M. elongata and poplar, a team led by Hui-Ling (Sunny) Liao of the University of Florida collected … were striking. Adding PM193 caused poplar cuttings to grow about 30 percent larger by dry weight than without PM193  . …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… enzyme family evolved across 90 species. “One unique thing about this work was our focus on all the kingdoms, including animals, plants, bacteria, … Korea as well as a faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley …
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Early evolution of the LIM homeobox gene family
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire … genes from isolates, there isn’t much scientists can tell about its function or its origin. As a result, these genes …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… (DOE) Joint Genome Institute, a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort … Mentors: Andrei Steindorff, Robert Riley, Jasmyn Pangilinan, Kurt LaButti Project:  Prediction and Identification … video below to see what some of the interns had to say about their time at the lab. …
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Soil metabolomics: Deciphering underground metabolic webs in terrestrial ecosystems
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