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Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning
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ARHGEF9 disruption in a female patient is associated with X linked mental retardation and sensory hyperarousal
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JGI@25: Roots of a Mutualist Relationship
In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the journal Nature . The mushroom has a symbiotic relationship with the poplar, a JGI … a broader ecosystem perspective, involving more multidisciplinary teams. The work also paved the way for a longstanding …
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The secondary metabolism collaboratory: a database and web discussion portal for secondary metabolite biosynthetic gene clusters
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Fungal Friends or Foes in Plant Roots
… fungi can form such symbiotic partnerships. To learn more about these other plant-fungal relationships, an … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of the key community participants and enabling future metagenomics studies.   … The sequencing project was funded by …
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The Genome Portal of the Department of Energy Joint Genome Institute
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The Phaeodactylum genome reveals the evolutionary history of diatom genomes
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative … the Sierra Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming … omics and computational resources with JGI’s cutting-edge genomics, DNA synthesis and complementary capabilities. …
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Alabama A&M Interns Access An Abundance of Knowledge
… fellow interns and scientists alike. Want to learn more about their experience? Watch the short video below. Video … fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna Watson: My mentor is Dr. Yi … experience in molecular biology and plant functional genomics, because this work is essential for improving crop …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
Sciences described a novel technique to access high-quality genomic information using minute quantities of DNA derived from individual … the larger research community a means to access microbial lineages from a variety of environments. In 2017, the first …
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Katherine Louie
… the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … and development of high-throughput untargeted analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie … and custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and …
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Root-associated bacterial communities and root metabolite composition are linked to nitrogen use efficiency in sorghum
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