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A metagenomics roadmap to the uncultured genome diversity in hypersaline soda lake sediments
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Natural Prodcast Episode 3: The Primer, Part 3
… a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about sponges, go pull … able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … Something that’s you know …  ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less …
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Soil virus offers insight into maintaining microorganisms
… effort, researchers have identified a protein in soil viruses that may promote soil health. The work was … AMGs in soil viruses thought to break down chitin, the gene sequences were cloned by the JGI.  The JGI’s DNA synthesis … and AMGs. It could spawn future research into understanding why these AMGs exist in the first place, and what function …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The Science … which microbes in the soil persist after a wildfire — and why they thrive — gives forest managers more avenues to … builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful snapshot of what soils …
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Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines
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Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2T
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. Last year, the JGI surpassed three Petabases of data sequenced — that’s three-quadrillion base pairs of DNA … for a time-series experiment from the highly-studied Lake Mendota is told as part of a three-part series of our  …
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Industry Engagement Program
… our User Program’s Community Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium … To meet these needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to biodesign, single-cell …
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Biodesign
… capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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Frequently Asked Questions: Project Management
… I request a culture/slant/DNA of an organism that has been sequenced at the JGI? …
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Data Policy
… embargo starting at construct or strain delivery.  Detailed sequence information and constructs are made publicly …
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Project Management Office
… Natasha Brown Supply Chain Manager Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy …
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