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Natural Prodcast Episode 17: Cassandra Quave
… use successfully, hopefully, in the future even more so as novel therapies. And that’s how I got on that path of … culture-disconnected. Like we’ll take some soil samples and sequence all the bugs out of that or whatever. And so I was … methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? …
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Natural Prodcast Episode 3: The Primer, Part 3
… lot of like synthetic chemistry effort to create a bunch of novel compounds that actually didn’t pan out. DAN: And there … able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … Something that’s you know …  ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less …
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Natural Prodcast Episode 1: The Primer, Part 1
… Laboratory. Being a User Facility means that scientists from all over the world bring us big problems related to … stories about natural products, so you can get a feel for why I think they’re so important, and we’ll start to explain … as we go on, so if you hear a topic you’d want us to dive deeper on, let me know! All right, so here we go. This is …
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Special Initiatives & Programs
… capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … with grants funded by DOE-BER requiring support from the JGI may  submit proposals here . Investigators … Researchers also study ways to develop valuable byproducts from lignin left over after biomass processing. Great Lakes …
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Natural Prodcast Episode 16: Marcy Balunas
… does some really exciting work there. And I thought, well, why don’t we try to go to Alaska and see what we can find … We find chemistry that’s known, or sometimes novel, but often known, and yet the clusters don’t look the … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic … in learning how these microbes have learned to adapt from marine to hypersaline conditions by studying the … Impact By collecting and sequencing dominant haloarchaeal sequences from six hypersaline lakes, researchers focused on …
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Frequently Asked Questions: Proposal Submission
… are open to both domestic and international applicants from any institution type and at any career stage. … users are able to work with Berkeley Lab.  However, users from certain countries (Iran, North Korea, Cuba, and Syria), need DOE permission and authorization from other U.S. government agencies to work with Berkeley …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) … of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural … Deep learning algorithms can vectorize faces… … so, why not proteins?         …
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Natural Prodcast Episode 9: Roger Linington
… Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. … Apple Podcasts or wherever you’re getting this and tell me why you’re listening. DAN: But, now, here’s Natural Prodcast … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …
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Institutional User Agreements
… and delays on the work. The transfer of a proposal from one commercial institution to a new commercial … Before work can begin on proposals submitted by researchers from another DOE National Laboratory, a JGI-BDLUA ,  BDLUA … multiple collaborator proposals submitted by researchers from another Federal Agency, all collaborating institutions …
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CalTeach
… program for undergraduate majors interested in developing a deep understanding of STEM teaching & learning. Their …
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Natural Prodcast Episode 18: A CSP Primer
… interview with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these …
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