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A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … al. (2015) Microbial species delineation using whole genome sequences. Nucleic Acids Res. 43(14):6761-71 Kyrpides NC et …

Apple Podcasts or wherever you’re getting this and tell me why you’re listening. DAN: But, now, here’s Natural Prodcast … to try and create an open source database of all known microbial natural products. So if you think about natural … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …

… at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways … Canada. I just got back from a conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And …

… capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … breakthroughs in basic science, and is exploring microbial-based synthesis of fuels beyond ethanol. … The JGI … and personnel resources for genomic research and sequence-based science.  Projects include de novo generation …

… embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …

… for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) … I request a culture/slant/DNA of an organism that has been sequenced at the JGI? … How do I check the current status of …

… (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types …

Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …

And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … polyketide synthase and then P3. We still don’t know why 20 years later. JACKIE WINTER: It’s pretty amazing, … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme …

We focus our efforts on integrating database mining and sequence design with scaling the production of large, … developing methods for converting digital information from sequence databases into biotechnological or environmental …

Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … genomic biodiversity. Using publicly available genome sequence data generated over the past three decades, their … group. “Turns out that despite all the genomes we've sequenced, we've only scratched the surface.” The study, …