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… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … . … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and …

… info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these programs can … And I think also the quality that we provide. So for fungal and for a lot of our eukaryotic genomes, all our … you have questions about project relevance or experimental protocols, contact Deputy for User Programs, Tanja Woyke , …

Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each … to advancing the frontiers of environmental and energy genomics.  For more information about the science depicted, click here …

… of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … where I was a graduate student. Aflatoxin, of course, is a fungal natural product which is a liver toxin when humans … on this: Most of the machinery in any living organism are proteins, which are made up of chains of amino acids. …

… just deposit and take off. And so they must be chemically protected in some way and lo and behold it’s this bacteria. … what we know is they’re quite selective in some way for antifungal activity. They are also, some of them, are … there’s no reason for that diversity of thought to be all white males for sure. And I think natural products does a …

… inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates … and single cells. This effort uncovers novel genes, protein families, and pathways, enhancing our understanding …

As an Integrative Genome Science User Facility, the JGI plays a … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, … infrastructure of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant community …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … state-of-the-art data processing and analysis pipelines for the interpretation of microbiome omics data Developing …

… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … Diversity . And there’s something called the Nagoya Protocol on access and benefit sharing. And for a very long … could be used to treat these highly resistant bacterial and fungal pathogens. And we’ve actually just wrapped up a year, …

… not enough time and money. I mean, we have a huge marine fungal project in collaboration with Bill Fenical at … as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary … are not publicly available because sometimes we want to protect the clusters we’re working on and not get scooped. …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … have, right? He was looking for a postdoc and just wrote an email to everyone. And I’m like, oh, I’m looking for …

… the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the DOE Joint Genome … and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes …