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Natural Prodcast Episode 14: Nigel Mouncey
… new strains and new process improvements and new ways to recover spinosyns. And so we had a high throughput screening platform where we’d look at 10,000, 15,000, 20,000 mutants a week. We started doing a whole bunch of … Non-model Bacteria Check out the agenda for the JGI’s 2021 Annual Genomics of Energy & Environment Meeting   …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… was done to gain insights into gene families involved in adaptations seen in later plant lineages. The team found … … The work (proposal: award at  https://doi.org/10.46936/10.25585/60001405 ) conducted by the US Department of Energy … US Department of Energy operated under contract no. DE-AC02-05CH11231. This project received funding from the …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… of eukaryotic phytoplankton — not prokaryotes,” said Thomas Mock, marine microbiologist at the University of East Anglia … are.” But according to a new study published September 16, 2021 in Nature Communications , warmer waters and … Biogeography of Algal Microbiomes from the Arctic to the Antarctic … Behind the Paper …
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Next generation sequencing data of a defined microbial mock community
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Year in Review: JGI’s 2018 Progress Report Available Now
… notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and … of active genes in fungi.  Nature Genet.  49(6):964-968. Mock et al (2017) Evolutionary genomics of the cold-adapted … 28: 957-963. Worden AZ et al. Green evolution and dynamic adaptations revealed by genomes of the marine …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … water mold, genetically related to such aquatic species as diatoms and kelp. Dubbed Phytopthora ramorum (pronounced: … Tyler BM et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis . …
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Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus
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Natural Prodcast Episode 23: Aaron Puri
… was like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed … lab now is use these as a resource for natural product discovery because we can genetically manipulate them. I think … and an unusual acyl-homoserine lactone signal . mBio. 2023 Aug 31;14(4):e0101023. doi: 10.1128/mbio.01010-23. …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the … Science Program. For most months each year, Ace Lake is covered in thick ice, with a combination of marine and … was supported by the Australian Research Council (DP150100244) and the Australian Antarctic Science program (project …
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Impact of library preparation protocols and template quantity on the metagenomic reconstruction of a mock microbial community
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