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Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … Jackie. And thanks Dan. I really enjoyed listening to this podcast. And Alison has done a really nice job of providing … JGI has that really got me into that because we had these new genomes that JGI had sequenced that were of these …
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FICUS
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides … being lack of relevance to DOE mission areas.  Initiate a new LOI by logging into the   EMSL User Portal  and clicking …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science … Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … of Science. In December 2019, the JGI relocated to the newly-built Integrative Genomics Building (IGB), a home it …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to … based on functional traits. These advancements provide new insights into microbial ecosystems.  The Program also … viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of … These advancements contribute to the development of new biofuels and sustainable biochemicals. The DNA Synthesis … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …
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User Programs
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED … who have not been a PI on any approved proposal with the JGI Investigators interested in translating genomic …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation … Reach the next generation of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has:  11 CSU …
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Institutional User Agreements
… must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix … for the signing official. User Institutions with an active JGI User Agreement older than January 2024 will be required … address the DNA Synthesis program. When fully executed, the new User Agreement will replace the active version. For …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in …
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Examples: Successful LOIs & Submissions
Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities … … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional Genomics …
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Data Ecosystem
… as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its … for microbiome data science, and the development of new informatics tools specifically optimized for … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to …
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