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Natural Prodcast Episode 20: Brian Bachmann
… went on to work at a groundbreaking company in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … by chemical synthesis and make analogs in combination of mutagenesis and direct evolution. Yeah. DAN UDWARY: So it’s …
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology …
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Natural Prodcast Episode 9: Roger Linington
… products field as it relates to structure elucidation and genome mining, and how we might start to better connect … the idea that you could go internationally to do the next stage of your training and that there might be more to be … hear more science from her, check out her podcast, Genome Insider. She talks to lots of great scientists outside of …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … maybe obvious or notable. We are still in – not an early stage. I think we can identify most secondary metabolism … hear more science from her, check out her podcast, Genome Insider. She talks to lots of great scientists outside of …
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Contrasting Life Strategies of Viruses that Infect Photo- and Heterotrophic Bacteria, as Revealed by Viral Tagging
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … view of both plant and fungal activity at different stages of this symbiosis. Within that activity, Serrano, Cole …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … and listen to the first two parts ( part 1 is here and part 2 is here ) so you understand what’s happened so far in the … hear more science from her, check out her podcast, Genome Insider. She talks to lots of great scientists outside of …
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Plant Program
… improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … accessions) and protocols (transformation, crossing, mutagenesis) are available to the community.   … EcoFABs link … It is now available for both eukaryotic and microbial metagenome assemblies. It is also available as an app in KBase …
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Secondary Metabolites Program
… not essential for fundamental growth, provide critical advantages to the organisms producing them, and are often … of cell-free based expression platforms: Only 10-20% of BGCs are expressed under standard laboratory … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find … hear more science from her, check out her podcast, Genome Insider. She talks to lots of great scientists outside of …
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Natural Prodcast Episode 16: Marcy Balunas
… almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … That is one of the really big frontiers for the next stage of natural product drug discovery I think. Or even … to hear more science from her, check out her podcast Genome Insider. She talks to lots of great scientists outside of …
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