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Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost.
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Metabolomics
… of the role small molecules play in diverse biological systems, sheds light on nutrient cycling, and leads to the … samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as different types …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 2
… and isotopes to track how viruses influence the flow of carbon in permafrost.  …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… in order to challenge or kill off competition, right? And plants do the same sorts of things. And then, bacteria often … peptides, remember, are big, complicated enzyme systems that really just exist to pull an amino acid out of … you can basically usually predict, within a certain level of certainty, exactly what peptide is being produced …
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Partners
… with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the … Genomics Institute for DNA and RNA extractions to support plant and other efforts. The JGI works closely with DOE … Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and the National …
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Secondary Metabolites Program
… of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for … metabolites produced by bacteria, fungi, algae and plants. These compounds are key to organisms' interactions … by their native hosts. We are developing cell-free based systems to express BGCs that alleviate the constraints of …
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Microbial polyphenol metabolism is part of the thawing permafrost carbon cycle
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the … determine if these fungi act as friends or foes. The Impact Microbial communities comprised of fungi and bacteria can … Programme: Deconstruction and Reconstruction of the Plant Microbiota (SPP DECRyPT 2125)’ and the Cluster of …
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Natural Prodcast Episode 16: Marcy Balunas
… know what they’re doing much better than I ever can at the level that we’re working. And so we do host-microbe … to do an independent study on ethnobotany of some of the plants that people were using for medicines in this very … to that and what you guys do when you’re exploring your systems. Because I think the JGI has a little bit of a …
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Genome-centric view of carbon processing in thawing permafrost
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
… viruses impact the release of greenhouse gases from Arctic permafrost. But to see what they’re doing, he first needs …
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Cataloging the Microbes that Manage the Health of River Systems
… a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … information at multiple scales from genes to the community level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy …
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