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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … an unlimited number of proposals).  For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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Natural Prodcast Episode 18: A CSP Primer
… molecules obviously play a huge role in ecology through cell-cell communication, chemical warfare, and symbiotic … Science program. It used to actually stand for Community Sequencing Program. Also CSP, same acronym. But as JGI, as a … for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow cytometry for …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … gene clusters. And I had heard the first rumors of people sequencing like these enormous numbers of genomes, like 20 … sometimes correlated or anti correlated, also with other cellular functions in the same and as it was other bacteria …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … for example, in terms of the stereochemistry, such that single changes can lead to a particular high activity … us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …
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JGI Portals
… and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … all JGI genomic databases and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data …
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … predict or just understand better the language of microbial cell-cell communication. And he told us about his work in … and they were able to synthesize the genes for every single one of those and put them in individual plasmids and …
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Homepage
…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome …
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Sequencing of Genomes from Environmental Single Cells
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the science. Hear …
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