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Institutional User Agreements
… Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must have the legal authority to commit your institution or organization to the terms and conditions in the User Agreement.  These … the Contracts Officer will send required paperwork to your institution. (Samples of the JGI User Agreement , …
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Viral Genomics Group
… and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The … While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, … microbiome processes is still limited. One key challenge is to complement diversity surveys ( Who is there? ) with …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … Check out our organism-agnostic CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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JGI Advisory Committees Code of Conduct
… staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core … valuing a diversity of views and opinions; Exercise tolerance for diverse ideas and a commitment to free inquiry …
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Microbiome Data Science Team
… discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … dark matter as well as the development of novel methods to enable large-scale comparative analysis, mining and …
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Breeding of microbiomes conferring salt tolerance to plants
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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Offerings & Capabilities
… Technologies department is   ensuring users have access to cutting-edge capabilities to help advance their science by generating data in three … To meet these needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, single-cell …
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Salt tolerance of two perennial grass Brachypodium sylvaticum accessions
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …
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Alabama Agricultural & Mechanical University Internship Program
… Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in … their scientific skills and collaborating with their mentors and fellow interns. Inspired by the success of the UC … program, they left the JGI more confident and ready to tackle real-world scientific issues. Our interns say …
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New Insights Into the Influence of Plant and Microbial Diversity on Denitrification Rates in a Salt Marsh
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