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… occupy more space on Earth than any other ecosystem. Therefore, understanding the microbial activity that dominates … these frigid systems, where organisms higher up in the food web like fish do not exist, nutrient cycling takes place … for metagenomic sequencing. A study  recently published in  Microbiome shows that the way nutrients flow through the …

… components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … state-of-the-art data processing and analysis pipelines for the interpretation of microbiome omics data Developing …

… the pandemic in Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun … welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … in collaboration with other people, lake sediments. We have microbiomes from different organisms, including the human …

… it’s a little hard to find in print, but we live in the information age and the ebook version is available at most … that I think we’re doing here. If you have suggestions for others feel free to let me know by emailing … and very cool research. I hope you’ll stick around. But, for now, here’s episode 3 of the Primer! — DAN: So, you …

I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … which includes screening methods, genome mining in cave microbiomes, and using engineered biosynthetic pathways and … Metabolites Collaboratory and trying to have a good catalog of what’s out there so that we can do more …

… so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this … the sponges or other things. And we know lots more about microbiomes and symbionts that live with other organisms, … to its mouth. We’ll have to put a picture of this on the website.  DAN: I guess looking at these is kind of like …

Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready for the public to tear it up. I’m super excited about this … all of those have ended up in the SMC database. There’s a web front end for it, and it’s just a massive pile of data. …

… has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the … DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to …

Sugarcane was the last major crop without a reference quality genome and now crop researchers can work … world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 has been  …

… not good at that, you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m … We're trying to. JACKIE: So I was reading on your website that-- speaking of hormones, that you're also using … of organisms, so things like the NRL database - or online catalog, I guess. So we've also been able to get soils from …