FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus
Results
Ecophysiology of Freshwater Verrucomicrobia Inferred from Metagenome-Assembled Genomes
Optimizing de novo genome assembly from PCR-amplified metagenomes
MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomes.
Dominant nitrogen metabolisms of a warm, seasonally anoxic freshwater ecosystem revealed using genome resolved metatranscriptomics
Tackling soil diversity with the assembly of large, complex metagenomes
Reevaluating the Salty Divide: Phylogenetic Specificity of Transitions between Marine and Freshwater Systems
Impact of fire on active layer and permafrost microbial communities and metagenomes in an upland Alaskan boreal forest
Depth-discrete metagenomics reveals the roles of microbes in biogeochemical cycling in the tropical freshwater Lake Tanganyika
Metagenomes and Metagenome-Assembled Genomes from Microbiomes Metabolizing Thin Stillage from an Ethanol Biorefinery
Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade
IMG/M: a data management and analysis system for metagenomes
