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Natural Prodcast Episode 15: Katherine Duncan
I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … that I’ve appreciated since starting my own group is these tools, in terms of looking at the chemistry produced by … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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New Lineages of Life Group
… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the Group Lead …
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Offerings & Capabilities
… to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation, … and further advancing sequence applications, single cell genomics, DNA synthesis, and metabolomics.   … Deputy of …
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Protocols
… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA … can be found here . DNA Extraction Protocols: … Tips for High Molecular Weight DNA extraction: … RNA Extraction …
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Products
… to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … Metabolite annotation based on chemical standards or computational approaches. Relative abundance of identified … based on feasibility and scientific merit.  Arizona Genomics Institute will produce HMW DNA needed for these …
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … we’re now very much – we’re interested in how we can build tools which will let us see the whole landscape of natural … anyway, to anywhere tackle that. So you’ve got to do it computationally. Right? So where do we start with that? …
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Mission
… and resources. Our vision is to lead genomic innovation for a sustainable bioeconomy. ALL PROPOSALS must support the … sequencing, DNA design and synthesis, metabolomics and computational analysis that enable systems-based scientific … scientific discovery. Projects focused on organisms for comparative purposes, on model systems for microbe-microbe …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that … CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, … and Golden Gate methods SynTrack and associated tools, which track samples through the JGI’s Synthetic …
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Natural Prodcast Episode 20: Brian Bachmann
I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … a good catalog of what’s out there so that we can do more comparative analysis and maybe– I don’t know– start to put … an undergraduate and not succeeding and still using all the tools from mechanistic enzymology to natural product …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 … individual user facilities. A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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VISTA Region Viewer (RViewer)—a computational system for prioritizing genomic intervals for biomedical studies
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Tour the IGB
… to advancing the frontiers of environmental and energy genomics.  For more information about the science depicted, click here . …
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