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… as the rhizosphere), researchers hope this massive and integrated data set will help identify how different … streambanks, wildlife habitats and water-quality regulation. Focusing on the rhizosphere and interactions … revealed key metabolic pathways and metabolites associated with the tree’s stress response. Finally, using …

… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology … a method that enables high-throughput characterization of transcription factor binding sites and which has been … single-nuclei sequencing methods to characterize gene regulation at the level of individual cells across diverse …

… considered for bioenergy feedstock development. Summary With the aim of producing at least one reference genome for … of life, they tracked the evolution of 5mC pathways across 528 species. The researchers found that unlike most flowering … are unwrapping complex mechanisms of genome-wide regulation and cataloging them in JGI’s fungal portal …

… Natural Products conference, which took place last January 2020 in San Diego. San Diego, of course, is the “home turf” … lucky to get some time to sit down and have a great chat with him.  I kind of lost count of how many times Brad used … that we can correlate environmental signals back to active transcription. There’s always been a big mystery in the …

… Notices Data Portal files will be inaccessible July 22–July 24 for computing upgrades . We regret any … a new login service, requiring the use of an ORCID account with two-factor authentication enabled to log in. Check our … available genomes from three domains of life, in a uniquely integrated context. IMG/M provides tools for analyzing the …

… Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and including those associated with microeukaryotes. The program also studies giant …

… of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team … is to complement diversity surveys ( Who is there? ) with activity measurements ( Who is active when/where, and … in natural soil ecosystems by combining metagenomics with other omics approaches, including especially …

… week is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and … from the microbes in that soil, there are now international regulations that provide a structure for ensuring that the … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …

… We offer internship opportunities through working directly with specific universities, continuing education programs in the Bay Area, and established programs affiliated with the Berkeley Lab A-LIFT team.    Overall, our aim is to … internship partnership that started in the summer of 2014. …

… candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count … anchors for metagenomes studies.  While uncovering the metabolic potential of uncultivated lineages is of high … trait or phenotype of interest, prior to and in conjunction with whole genome sequencing. …

… technologies to bacteria, yeasts and algae previously with little to no genetic tools enabling heterologous … types, in which DNA-based molecules can be chromosomally integrated into a taxonomically diverse suite of microbial …