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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint … to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting some conversations … more interested just to see if we can use Aspergillus as a model for expressing hard to work with eukaryote [genes]. So …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion … Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint … so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this … secrete a lot more things than people do…? Although I don’t study people so maybe I’m wrong. But yeah, I mean, because I …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science and …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of … as the fermentation process itself. And we built a nice modeling feedback loop for the fermentation work, which … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint … it’s a little hard to find in print, but we live in the information age and the ebook version is available at most … to go ahead and, and synthesize those genes within a model organism like E.coli , and have it produce the …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint … of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … crack this case, then that would open up our field to other study. And so it was kind of an early example, to try to …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about … This was a first of its kind project, but it is a great model of how the JGI can partner and help train the next …
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Brachypodium as an emerging model for cereal–pathogen interactions
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … I’m definitely seeing why this is such an important area to study. Okay, what’s your third story?  DAN: The third story …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER data ecosystem.  A data … biology. The collaborations present exciting possibilities for scientific exploration, granting access to diverse … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has …
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