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… develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … (Berkeley Lab) describe a computational pipeline that can specifically scan for those snowflakes, or RNA virus …

National Prodcast. This continues our little section on international genome miners, and today we have Francisco … are shaping each part of the metabolic network in each specific organism. Really, what matters is the forces that … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  DAN:  And … sequence into an antibiotic that kills bacteria through a specific mechanism. Or whatever that peptide might be doing. … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… is triggered when nutrients are acquired from an external source.  The work is part of the JGI’s 1000 Fungal … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome … available on JGI’s fungal portal  MycoCosm . Based on these analyses, we conducted further field experiments to …

… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … data science, and the development of new informatics tools specifically optimized for high-performance computing … … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that go well beyond …

… group provides computational analysis for new technology development and JGI user science projects. We perform … epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product … development of automated analysis pipelines for standard sequencing products performed at scale. Our group also …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … DOE Quarterly Metrics Q1 – Report on new computational developments for improving microbial, metagenomic, or plant …

… started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help … I’m very happy to talk to you. And so this is the third international meeting on natural products, but as a new, I call … chance to deliver this molecule – very toxic molecule – to specific disease cells. So, the very first compound was …

… things, because a lot of what we do at JGI in terms of the sequencing that we do is very people-disconnected, and … drug from the microbes in that soil, there are now international regulations that provide a structure for ensuring … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …